Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.54□□□□□ -0.4
Nkx6-3Q3UHX8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-3Q3UHX8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-3Q3UHX8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Mir874-201ENSMUST00000104769 76 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Gm28693-202ENSMUST00000190758 331 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkx6-3Q3UHX8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms