Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.13□□□□□ -0.47
Spg11Q3UHA3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Mir1956-201ENSMUST00000157748 65 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm5340-201ENSMUST00000203733 880 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm12501-201ENSMUST00000119163 529 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms