Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.08□□□□□ -0.96
Cops9Q3U898 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cops9Q3U898 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cops9Q3U898 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cops9Q3U898 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.08□□□□□ -0.96
Cops9Q3U898 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.08□□□□□ -0.96
Cops9Q3U898 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.08□□□□□ -0.96
Cops9Q3U898 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.08□□□□□ -0.96
Cops9Q3U898 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cops9Q3U898 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.07□□□□□ -0.96
Cops9Q3U898 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cops9Q3U898 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.07□□□□□ -0.96
Cops9Q3U898 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cops9Q3U898 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cops9Q3U898 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cops9Q3U898 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cops9Q3U898 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms