Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm19931-201ENSMUST00000198920 368 ntBASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cul4aQ3TCH7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Gm5279-201ENSMUST00000199575 745 ntBASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cul4aQ3TCH7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cul4aQ3TCH7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cul4aQ3TCH7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms