Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.09□□□□□ -0.31
Q3KNL4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.09□□□□□ -0.31
Q3KNL4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Q3KNL4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Q3KNL4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
Q3KNL4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.08□□□□□ -0.31
Q3KNL4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Q3KNL4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Q3KNL4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Q3KNL4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Q3KNL4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Gm17795-201ENSMUST00000214505 757 ntBASIC13.08□□□□□ -0.32
Q3KNL4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.08□□□□□ -0.32
Q3KNL4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.08□□□□□ -0.32
Q3KNL4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Q3KNL4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q3KNL4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.07□□□□□ -0.32
Q3KNL4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Q3KNL4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Q3KNL4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Q3KNL4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.07□□□□□ -0.32
Q3KNL4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.07□□□□□ -0.32
Q3KNL4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.07□□□□□ -0.32
Q3KNL4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Q3KNL4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q3KNL4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.06□□□□□ -0.32
Q3KNL4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms