Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm4726-201ENSMUST00000135604 736 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm6019-201ENSMUST00000148369 736 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm26875-201ENSMUST00000181006 950 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 BC037039-201ENSMUST00000192003 2205 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm20414-201ENSMUST00000172918 646 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm24791-201ENSMUST00000104284 131 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm14832-201ENSMUST00000121289 322 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm45598-202ENSMUST00000210719 986 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.78□□□□□ -0.52
Chd8Q09XV5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd8Q09XV5 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 Mir698-201ENSMUST00000102164 109 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm8451-201ENSMUST00000170338 447 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm2875-201ENSMUST00000211333 360 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm7536-201ENSMUST00000077389 444 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 Gm5453-201ENSMUST00000080866 447 ntBASIC11.77□□□□□ -0.52
Chd8Q09XV5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms