Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.08□□□□□ -0.64
Tff1Q08423 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Gm8927-201ENSMUST00000181978 981 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Gm46209-201ENSMUST00000217912 553 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.08□□□□□ -0.64
Tff1Q08423 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Gm6180-201ENSMUST00000065243 498 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Gm3222-201ENSMUST00000071282 990 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.08□□□□□ -0.64
Tff1Q08423 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tff1Q08423 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tff1Q08423 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.08□□□□□ -0.64
Tff1Q08423 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tff1Q08423 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tff1Q08423 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Mir698-201ENSMUST00000102164 109 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Tff1Q08423 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tff1Q08423 Gm21470-201ENSMUST00000187680 696 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tff1Q08423 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tff1Q08423 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.07□□□□□ -0.64
Tff1Q08423 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.07□□□□□ -0.64
Tff1Q08423 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.07□□□□□ -0.64
Tff1Q08423 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tff1Q08423 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tff1Q08423 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.07□□□□□ -0.64
Tff1Q08423 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tff1Q08423 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tff1Q08423 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.06□□□□□ -0.64
Tff1Q08423 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.06□□□□□ -0.64
Tff1Q08423 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Gm8602-201ENSMUST00000184045 607 ntBASIC11.06□□□□□ -0.64
Tff1Q08423 Gm29667-201ENSMUST00000190817 490 ntBASIC11.06□□□□□ -0.64
Tff1Q08423 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.06□□□□□ -0.64
Tff1Q08423 Gm18062-201ENSMUST00000208020 547 ntBASIC11.06□□□□□ -0.64
Tff1Q08423 Gm18055-201ENSMUST00000208254 547 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms