Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gm22018-201ENSMUST00000104357 131 ntBASIC13.48□□□□□ -0.25
Ebf1Q07802 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.48□□□□□ -0.25
Ebf1Q07802 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gm43118-201ENSMUST00000199149 775 ntBASIC13.48□□□□□ -0.25
Ebf1Q07802 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.48□□□□□ -0.25
Ebf1Q07802 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ebf1Q07802 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Ebf1Q07802 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf1Q07802 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm26927-201ENSMUST00000182385 965 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm45930-201ENSMUST00000221330 292 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.47□□□□□ -0.25
Ebf1Q07802 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf1Q07802 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf1Q07802 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.46□□□□□ -0.25
Ebf1Q07802 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf1Q07802 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms