Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Atf4Q06507 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm12507-201ENSMUST00000119155 415 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Atf4Q06507 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.87□□□□□ -0.35
Atf4Q06507 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm6047-201ENSMUST00000167221 574 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Atf4Q06507 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm37466-201ENSMUST00000195692 652 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Atf4Q06507 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.87□□□□□ -0.35
Atf4Q06507 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Atf4Q06507 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Atf4Q06507 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Atf4Q06507 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Atf4Q06507 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Atf4Q06507 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Atf4Q06507 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.86□□□□□ -0.35
Atf4Q06507 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm4804-201ENSMUST00000182234 999 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm28180-201ENSMUST00000189608 722 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm44582-201ENSMUST00000209125 445 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Atf4Q06507 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Atf4Q06507 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Atf4Q06507 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.86□□□□□ -0.35
Atf4Q06507 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atf4Q06507 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atf4Q06507 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms