Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.16□□□□□ -0.62
Npas1P97459 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.16□□□□□ -0.62
Npas1P97459 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.16□□□□□ -0.62
Npas1P97459 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Npas1P97459 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.16□□□□□ -0.62
Npas1P97459 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.15□□□□□ -0.62
Npas1P97459 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Npas1P97459 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.15□□□□□ -0.62
Npas1P97459 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.15□□□□□ -0.62
Npas1P97459 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.15□□□□□ -0.62
Npas1P97459 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Npas1P97459 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.15□□□□□ -0.62
Npas1P97459 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Npas1P97459 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Npas1P97459 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.15□□□□□ -0.62
Npas1P97459 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.15□□□□□ -0.62
Npas1P97459 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Npas1P97459 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npas1P97459 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npas1P97459 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.15□□□□□ -0.63
Npas1P97459 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Npas1P97459 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.15□□□□□ -0.63
Npas1P97459 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npas1P97459 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npas1P97459 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npas1P97459 BC001981-202ENSMUST00000191393 1545 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Npas1P97459 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.14□□□□□ -0.63
Npas1P97459 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.14□□□□□ -0.63
Npas1P97459 Gm13823-201ENSMUST00000119930 345 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms