Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC139350.1-201ENSMUST00000227064 1594 ntBASIC8.79□□□□□ -1
PrkdcP97313 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC8.78□□□□□ -1
PrkdcP97313 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC8.78□□□□□ -1
PrkdcP97313 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm44981-201ENSMUST00000205549 1943 ntBASIC8.78□□□□□ -1
PrkdcP97313 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC8.78□□□□□ -1
PrkdcP97313 Gm13809-201ENSMUST00000117921 597 ntBASIC8.78□□□□□ -1
PrkdcP97313 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC8.78□□□□□ -1
PrkdcP97313 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.78□□□□□ -1
PrkdcP97313 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.78□□□□□ -1
PrkdcP97313 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PrkdcP97313 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm17213-201ENSMUST00000165161 1360 ntBASIC8.78□□□□□ -1
PrkdcP97313 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.78□□□□□ -1
PrkdcP97313 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC8.78□□□□□ -1
PrkdcP97313 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.78□□□□□ -1
PrkdcP97313 Ighv1-86-201ENSMUST00000200562 353 ntBASIC8.78□□□□□ -1
PrkdcP97313 Gm18636-201ENSMUST00000218846 1066 ntBASIC8.78□□□□□ -1
PrkdcP97313 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 AC125209.1-201ENSMUST00000225812 766 ntBASIC8.78□□□□□ -1
PrkdcP97313 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm12856-201ENSMUST00000119471 1293 ntBASIC8.78□□□□□ -1
PrkdcP97313 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC8.78□□□□□ -1
PrkdcP97313 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 Gm26989-201ENSMUST00000182608 749 ntBASIC8.78□□□□□ -1
PrkdcP97313 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC8.78□□□□□ -1
PrkdcP97313 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC8.78□□□□□ -1
PrkdcP97313 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC8.78□□□□□ -1
PrkdcP97313 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC8.78□□□□□ -1
PrkdcP97313 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm6430-201ENSMUST00000054664 1248 ntBASIC8.78□□□□□ -1
PrkdcP97313 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PrkdcP97313 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
PrkdcP97313 CT010478.1-201ENSMUST00000220747 2787 ntBASIC8.77□□□□□ -1
PrkdcP97313 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
PrkdcP97313 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC8.77□□□□□ -1
PrkdcP97313 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC8.77□□□□□ -1
PrkdcP97313 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PrkdcP97313 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PrkdcP97313 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm8531-201ENSMUST00000188319 893 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm45504-201ENSMUST00000211407 2107 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PrkdcP97313 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Gm4654-201ENSMUST00000183305 982 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm5100-201ENSMUST00000195631 589 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm8768-201ENSMUST00000220020 826 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PrkdcP97313 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms