Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim43bP86448 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43bP86448 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim43bP86448 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Trim43bP86448 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43bP86448 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.7□□□□□ -0.22
Trim43bP86448 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43bP86448 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim43bP86448 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43bP86448 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim43bP86448 Gm44855-201ENSMUST00000205725 362 ntBASIC13.7□□□□□ -0.22
Trim43bP86448 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim43bP86448 Gm18027-201ENSMUST00000218947 619 ntBASIC13.7□□□□□ -0.22
Trim43bP86448 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim43bP86448 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.7□□□□□ -0.22
Trim43bP86448 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.7□□□□□ -0.22
Trim43bP86448 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43bP86448 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trim43bP86448 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.69□□□□□ -0.22
Trim43bP86448 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim43bP86448 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Gm2423-201ENSMUST00000074863 733 ntBASIC13.69□□□□□ -0.22
Trim43bP86448 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43bP86448 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.69□□□□□ -0.22
Trim43bP86448 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43bP86448 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms