Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Shox2P70390 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.13□□□□□ -0.31
Shox2P70390 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.13□□□□□ -0.31
Shox2P70390 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Shox2P70390 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Shox2P70390 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Shox2P70390 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Gm14859-201ENSMUST00000117752 357 ntBASIC13.12□□□□□ -0.31
Shox2P70390 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.12□□□□□ -0.31
Shox2P70390 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.12□□□□□ -0.31
Shox2P70390 Gm8927-201ENSMUST00000181978 981 ntBASIC13.12□□□□□ -0.31
Shox2P70390 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.12□□□□□ -0.31
Shox2P70390 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Gm3222-201ENSMUST00000071282 990 ntBASIC13.12□□□□□ -0.31
Shox2P70390 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shox2P70390 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.12□□□□□ -0.31
Shox2P70390 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shox2P70390 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.11□□□□□ -0.31
Shox2P70390 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shox2P70390 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.11□□□□□ -0.31
Shox2P70390 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Shox2P70390 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shox2P70390 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Shox2P70390 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Shox2P70390 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.1□□□□□ -0.31
Shox2P70390 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms