Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Msx3P70354 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msx3P70354 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.68□□□□□ -0.22
Msx3P70354 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.68□□□□□ -0.22
Msx3P70354 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Gm15371-201ENSMUST00000117057 784 ntBASIC13.68□□□□□ -0.22
Msx3P70354 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Msx3P70354 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Gm7730-201ENSMUST00000212486 454 ntBASIC13.68□□□□□ -0.22
Msx3P70354 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.68□□□□□ -0.22
Msx3P70354 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Msx3P70354 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Msx3P70354 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.67□□□□□ -0.22
Msx3P70354 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.67□□□□□ -0.22
Msx3P70354 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.67□□□□□ -0.22
Msx3P70354 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.67□□□□□ -0.22
Msx3P70354 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Msx3P70354 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.67□□□□□ -0.22
Msx3P70354 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.67□□□□□ -0.22
Msx3P70354 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Msx3P70354 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Msx3P70354 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.67□□□□□ -0.22
Msx3P70354 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Msx3P70354 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Msx3P70354 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.66□□□□□ -0.22
Msx3P70354 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Msx3P70354 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Msx3P70354 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Msx3P70354 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Msx3P70354 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.66□□□□□ -0.22
Msx3P70354 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Msx3P70354 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.66□□□□□ -0.22
Msx3P70354 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms