Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.1□□□□□ -0.63
Pdlim4P70271 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.1□□□□□ -0.63
Pdlim4P70271 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.1□□□□□ -0.63
Pdlim4P70271 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.1□□□□□ -0.63
Pdlim4P70271 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdlim4P70271 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm14928-201ENSMUST00000120198 477 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm15376-201ENSMUST00000122258 783 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm23984-201ENSMUST00000157139 203 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm45668-201ENSMUST00000211271 493 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.09□□□□□ -0.63
Pdlim4P70271 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pdlim4P70271 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdlim4P70271 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.08□□□□□ -0.64
Pdlim4P70271 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms