Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.69□□□□□ -0.54
Lsm6P62313 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Lsm6P62313 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Lsm6P62313 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm6P62313 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm6P62313 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Lsm6P62313 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm27437-201ENSMUST00000183429 107 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm18307-201ENSMUST00000206864 949 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm6P62313 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm6P62313 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.68□□□□□ -0.54
Lsm6P62313 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm6P62313 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm6P62313 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Lsm6P62313 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lsm6P62313 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Gm7488-201ENSMUST00000117148 684 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Gm12341-201ENSMUST00000119724 503 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.67□□□□□ -0.54
Lsm6P62313 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Gm29608-201ENSMUST00000190444 463 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.67□□□□□ -0.54
Lsm6P62313 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Gm26315-201ENSMUST00000083890 321 ntBASIC11.67□□□□□ -0.54
Lsm6P62313 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms