Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tpm1P58771 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tpm1P58771 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tpm1P58771 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tpm1P58771 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tpm1P58771 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Tpm1P58771 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.83□□□□□ -0.04
Tpm1P58771 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Gm16476-201ENSMUST00000221544 139 ntBASIC14.83□□□□□ -0.04
Tpm1P58771 Gm10175-201ENSMUST00000086013 645 ntBASIC14.83□□□□□ -0.04
Tpm1P58771 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tpm1P58771 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tpm1P58771 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.83□□□□□ -0.04
Tpm1P58771 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tpm1P58771 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tpm1P58771 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tpm1P58771 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Tpm1P58771 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.82□□□□□ -0.04
Tpm1P58771 Gm8927-201ENSMUST00000181978 981 ntBASIC14.82□□□□□ -0.04
Tpm1P58771 Gm21470-201ENSMUST00000187680 696 ntBASIC14.82□□□□□ -0.04
Tpm1P58771 Gm3222-201ENSMUST00000071282 990 ntBASIC14.82□□□□□ -0.04
Tpm1P58771 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Paupar-201ENSMUST00000194826 3482 ntBASIC14.82□□□□□ -0.04
Tpm1P58771 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tpm1P58771 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Tpm1P58771 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Tpm1P58771 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm1P58771 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.81□□□□□ -0.04
Tpm1P58771 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Gm15460-201ENSMUST00000118147 391 ntBASIC14.81□□□□□ -0.04
Tpm1P58771 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.81□□□□□ -0.04
Tpm1P58771 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.81□□□□□ -0.04
Tpm1P58771 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.81□□□□□ -0.04
Tpm1P58771 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tpm1P58771 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Tpm1P58771 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm1P58771 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms