Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Nub1P54729 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.34□□□□□ -0.11
Nub1P54729 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nub1P54729 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Gm27701-201ENSMUST00000184498 110 ntBASIC14.34□□□□□ -0.11
Nub1P54729 Gm2495-201ENSMUST00000191160 466 ntBASIC14.34□□□□□ -0.11
Nub1P54729 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.34□□□□□ -0.11
Nub1P54729 Gm6983-201ENSMUST00000214912 628 ntBASIC14.34□□□□□ -0.11
Nub1P54729 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.34□□□□□ -0.11
Nub1P54729 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nub1P54729 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nub1P54729 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nub1P54729 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Nub1P54729 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nub1P54729 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nub1P54729 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Nub1P54729 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.33□□□□□ -0.12
Nub1P54729 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.33□□□□□ -0.12
Nub1P54729 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nub1P54729 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.33□□□□□ -0.12
Nub1P54729 Gm7063-201ENSMUST00000186840 981 ntBASIC14.33□□□□□ -0.12
Nub1P54729 Gm28911-201ENSMUST00000188837 117 ntBASIC14.33□□□□□ -0.12
Nub1P54729 Gm9794-201ENSMUST00000202370 423 ntBASIC14.33□□□□□ -0.12
Nub1P54729 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nub1P54729 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.33□□□□□ -0.12
Nub1P54729 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nub1P54729 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nub1P54729 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.32□□□□□ -0.12
Nub1P54729 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nub1P54729 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nub1P54729 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.32□□□□□ -0.12
Nub1P54729 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.32□□□□□ -0.12
Nub1P54729 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm12490-201ENSMUST00000120255 560 ntBASIC14.32□□□□□ -0.12
Nub1P54729 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.32□□□□□ -0.12
Nub1P54729 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.32□□□□□ -0.12
Nub1P54729 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.32□□□□□ -0.12
Nub1P54729 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.32□□□□□ -0.12
Nub1P54729 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.32□□□□□ -0.12
Nub1P54729 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.32□□□□□ -0.12
Nub1P54729 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nub1P54729 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nub1P54729 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Nub1P54729 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms