Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SftpbP50405 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.63□□□□□ -0.23
SftpbP50405 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SftpbP50405 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
SftpbP50405 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpbP50405 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SftpbP50405 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SftpbP50405 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SftpbP50405 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.62□□□□□ -0.23
SftpbP50405 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.62□□□□□ -0.23
SftpbP50405 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpbP50405 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpbP50405 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Syt7-205ENSMUST00000224135 1557 ntBASIC13.62□□□□□ -0.23
SftpbP50405 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpbP50405 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SftpbP50405 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpbP50405 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpbP50405 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SftpbP50405 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Gm13616-201ENSMUST00000120600 222 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpbP50405 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.61□□□□□ -0.23
SftpbP50405 Gm7775-201ENSMUST00000218871 853 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Gm9063-201ENSMUST00000223299 582 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SftpbP50405 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SftpbP50405 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SftpbP50405 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SftpbP50405 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.61□□□□□ -0.23
SftpbP50405 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpbP50405 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
SftpbP50405 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.6□□□□□ -0.23
SftpbP50405 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.6□□□□□ -0.23
SftpbP50405 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
SftpbP50405 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SftpbP50405 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.6□□□□□ -0.23
SftpbP50405 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.6□□□□□ -0.23
SftpbP50405 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.6□□□□□ -0.23
SftpbP50405 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SftpbP50405 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.6□□□□□ -0.23
SftpbP50405 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SftpbP50405 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SftpbP50405 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SftpbP50405 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms