Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm18889-201ENSMUST00000174284 929 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm24513-201ENSMUST00000174964 138 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm27631-201ENSMUST00000184163 466 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm27397-201ENSMUST00000184997 107 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.01□□□□□ -0.65
Nkx2-1P50220 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-1P50220 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gm25287-201ENSMUST00000103846 110 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 Gm22918-201ENSMUST00000103855 110 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11□□□□□ -0.65
Nkx2-1P50220 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11□□□□□ -0.65
Nkx2-1P50220 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11□□□□□ -0.65
Nkx2-1P50220 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Nkx2-1P50220 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms