Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.52□□□□□ -0.24
Vps4bP46467 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Vps4bP46467 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Vps4bP46467 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps4bP46467 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps4bP46467 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Vps4bP46467 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4bP46467 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps4bP46467 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Vps4bP46467 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4bP46467 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4bP46467 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4bP46467 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Mir7221-201ENSMUST00000184009 72 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm45841-201ENSMUST00000207700 164 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.51□□□□□ -0.25
Vps4bP46467 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4bP46467 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps4bP46467 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Vps4bP46467 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Gm38144-201ENSMUST00000192790 465 ntBASIC13.5□□□□□ -0.25
Vps4bP46467 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4bP46467 Gm7730-201ENSMUST00000212486 454 ntBASIC13.5□□□□□ -0.25
Vps4bP46467 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4bP46467 Gm5161-201ENSMUST00000075243 853 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms