Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Sox18P43680 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Gm24830-201ENSMUST00000102024 166 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sox18P43680 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm12566-201ENSMUST00000121479 359 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Gm25890-201ENSMUST00000177643 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm22614-201ENSMUST00000178300 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm5523-201ENSMUST00000180415 997 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm2260-201ENSMUST00000184965 657 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sox18P43680 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Gm22042-201ENSMUST00000082989 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm26232-201ENSMUST00000083360 166 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm24136-201ENSMUST00000083374 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm26315-201ENSMUST00000083890 321 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Gm26110-201ENSMUST00000083971 165 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.81□□□□□ -0.36
Sox18P43680 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox18P43680 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox18P43680 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox18P43680 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox18P43680 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Sox18P43680 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Sox18P43680 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms