Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfsf9P41274 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf9P41274 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm16202-201ENSMUST00000117532 544 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm11618-201ENSMUST00000117946 267 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm37922-201ENSMUST00000195596 455 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf9P41274 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.73□□□□□ -0.37
Tnfsf9P41274 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.72□□□□□ -0.37
Tnfsf9P41274 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm14350-201ENSMUST00000116642 640 ntBASIC12.72□□□□□ -0.37
Tnfsf9P41274 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm4271-201ENSMUST00000174444 973 ntBASIC12.72□□□□□ -0.37
Tnfsf9P41274 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.72□□□□□ -0.37
Tnfsf9P41274 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.72□□□□□ -0.37
Tnfsf9P41274 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf9P41274 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.71□□□□□ -0.37
Tnfsf9P41274 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf9P41274 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms