Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.51□□□□□ -0.41
Sox6P40645 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.51□□□□□ -0.41
Sox6P40645 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox6P40645 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Gm4875-201ENSMUST00000118257 786 ntBASIC12.51□□□□□ -0.41
Sox6P40645 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox6P40645 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.51□□□□□ -0.41
Sox6P40645 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.51□□□□□ -0.41
Sox6P40645 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.51□□□□□ -0.41
Sox6P40645 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox6P40645 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.5□□□□□ -0.41
Sox6P40645 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox6P40645 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Sox6P40645 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.5□□□□□ -0.41
Sox6P40645 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Gm4804-201ENSMUST00000182234 999 ntBASIC12.5□□□□□ -0.41
Sox6P40645 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.5□□□□□ -0.41
Sox6P40645 Gm5425-201ENSMUST00000214125 459 ntBASIC12.5□□□□□ -0.41
Sox6P40645 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.5□□□□□ -0.41
Sox6P40645 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.5□□□□□ -0.41
Sox6P40645 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox6P40645 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox6P40645 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.49□□□□□ -0.41
Sox6P40645 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.49□□□□□ -0.41
Sox6P40645 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms