Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd9P40240 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cd9P40240 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Cd9P40240 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd9P40240 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.11□□□□□ -0.31
Cd9P40240 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.11□□□□□ -0.31
Cd9P40240 Gm12928-201ENSMUST00000117115 573 ntBASIC13.11□□□□□ -0.31
Cd9P40240 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.11□□□□□ -0.31
Cd9P40240 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.11□□□□□ -0.31
Cd9P40240 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Gm28911-201ENSMUST00000188837 117 ntBASIC13.11□□□□□ -0.31
Cd9P40240 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.11□□□□□ -0.31
Cd9P40240 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.11□□□□□ -0.31
Cd9P40240 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cd9P40240 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cd9P40240 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cd9P40240 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cd9P40240 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd9P40240 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cd9P40240 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd9P40240 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd9P40240 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cd9P40240 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd9P40240 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.1□□□□□ -0.31
Cd9P40240 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd9P40240 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cd9P40240 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.1□□□□□ -0.31
Cd9P40240 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cd9P40240 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cd9P40240 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.1□□□□□ -0.31
Cd9P40240 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.1□□□□□ -0.31
Cd9P40240 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cd9P40240 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd9P40240 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd9P40240 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd9P40240 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Cd9P40240 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.09□□□□□ -0.31
Cd9P40240 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Cd9P40240 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd9P40240 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd9P40240 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms