Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.67□□□□□ -0.54
Upk2P38575 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Gm6983-201ENSMUST00000214912 628 ntBASIC11.67□□□□□ -0.54
Upk2P38575 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.67□□□□□ -0.54
Upk2P38575 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.67□□□□□ -0.54
Upk2P38575 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Upk2P38575 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.67□□□□□ -0.54
Upk2P38575 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk2P38575 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.67□□□□□ -0.54
Upk2P38575 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.67□□□□□ -0.54
Upk2P38575 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk2P38575 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.67□□□□□ -0.54
Upk2P38575 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk2P38575 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Upk2P38575 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Upk2P38575 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Gm5866-201ENSMUST00000177881 973 ntBASIC11.66□□□□□ -0.54
Upk2P38575 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Gm44397-201ENSMUST00000195950 113 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Gm19931-201ENSMUST00000198920 368 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Gm15823-201ENSMUST00000064305 670 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.66□□□□□ -0.54
Upk2P38575 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk2P38575 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk2P38575 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Upk2P38575 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Upk2P38575 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Gm6447-201ENSMUST00000118905 835 ntBASIC11.65□□□□□ -0.54
Upk2P38575 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.65□□□□□ -0.54
Upk2P38575 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Upk2P38575 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.65□□□□□ -0.54
Upk2P38575 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.65□□□□□ -0.54
Upk2P38575 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk2P38575 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.65□□□□□ -0.54
Upk2P38575 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms