Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LdlrP35951 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LdlrP35951 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
LdlrP35951 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Gm12138-201ENSMUST00000122180 951 ntBASIC13.26□□□□□ -0.29
LdlrP35951 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LdlrP35951 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LdlrP35951 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Gm3436-201ENSMUST00000179930 840 ntBASIC13.26□□□□□ -0.29
LdlrP35951 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LdlrP35951 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Gm45668-201ENSMUST00000211271 493 ntBASIC13.26□□□□□ -0.29
LdlrP35951 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LdlrP35951 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.26□□□□□ -0.29
LdlrP35951 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LdlrP35951 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LdlrP35951 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.25□□□□□ -0.29
LdlrP35951 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Mir1897-201ENSMUST00000122581 272 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.25□□□□□ -0.29
LdlrP35951 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.25□□□□□ -0.29
LdlrP35951 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Gm42612-201ENSMUST00000197986 623 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Gm43170-201ENSMUST00000199827 612 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.25□□□□□ -0.29
LdlrP35951 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.25□□□□□ -0.29
LdlrP35951 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.25□□□□□ -0.29
LdlrP35951 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gm15823-201ENSMUST00000064305 670 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LdlrP35951 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LdlrP35951 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.25□□□□□ -0.29
LdlrP35951 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LdlrP35951 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms