Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thbs1P35441 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thbs1P35441 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thbs1P35441 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
Thbs1P35441 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.33□□□□□ -0.44
Thbs1P35441 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Thbs1P35441 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs1P35441 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.33□□□□□ -0.44
Thbs1P35441 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs1P35441 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Thbs1P35441 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Thbs1P35441 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.32□□□□□ -0.44
Thbs1P35441 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.32□□□□□ -0.44
Thbs1P35441 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Gm6546-201ENSMUST00000192096 766 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 Gm18363-201ENSMUST00000221671 730 ntBASIC12.32□□□□□ -0.44
Thbs1P35441 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Thbs1P35441 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Thbs1P35441 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Thbs1P35441 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.32□□□□□ -0.44
Thbs1P35441 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs1P35441 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms