Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nedd8P29595 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nedd8P29595 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.25□□□□□ -0.45
Nedd8P29595 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.25□□□□□ -0.45
Nedd8P29595 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.25□□□□□ -0.45
Nedd8P29595 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nedd8P29595 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nedd8P29595 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.25□□□□□ -0.45
Nedd8P29595 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nedd8P29595 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.24□□□□□ -0.45
Nedd8P29595 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nedd8P29595 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nedd8P29595 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nedd8P29595 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.24□□□□□ -0.45
Nedd8P29595 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nedd8P29595 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nedd8P29595 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nedd8P29595 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nedd8P29595 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Nedd8P29595 Gm9385-201ENSMUST00000117563 472 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.23□□□□□ -0.45
Nedd8P29595 Gm6443-201ENSMUST00000203599 874 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms