Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.2■□□□□ 0.02
Vcam1P29533 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm12502-201ENSMUST00000120197 444 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Gm11964-201ENSMUST00000120982 444 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm18056-201ENSMUST00000207670 568 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm18061-201ENSMUST00000208350 562 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Gm18063-201ENSMUST00000208529 568 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Gm18052-201ENSMUST00000208750 559 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vcam1P29533 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Vcam1P29533 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vcam1P29533 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm15236-201ENSMUST00000117309 379 ntBASIC15.19■□□□□ 0.02
Vcam1P29533 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Vcam1P29533 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.19■□□□□ 0.02
Vcam1P29533 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.19■□□□□ 0.02
Vcam1P29533 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.19■□□□□ 0.02
Vcam1P29533 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vcam1P29533 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Vcam1P29533 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vcam1P29533 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vcam1P29533 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcam1P29533 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.18■□□□□ 0.02
Vcam1P29533 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.18■□□□□ 0.02
Vcam1P29533 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Gm15808-201ENSMUST00000119046 604 ntBASIC15.18■□□□□ 0.02
Vcam1P29533 Gm17376-201ENSMUST00000166016 84 ntBASIC15.18■□□□□ 0.02
Vcam1P29533 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Vcam1P29533 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.18■□□□□ 0.02
Vcam1P29533 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.18■□□□□ 0.02
Vcam1P29533 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.18■□□□□ 0.02
Vcam1P29533 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vcam1P29533 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.18■□□□□ 0.02
Vcam1P29533 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.18■□□□□ 0.02
Vcam1P29533 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcam1P29533 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.17■□□□□ 0.02
Vcam1P29533 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vcam1P29533 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.17■□□□□ 0.02
Vcam1P29533 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms