Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Gm16202-201ENSMUST00000117532 544 ntBASIC13.25□□□□□ -0.29
Nckap1P28660 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Gm37008-201ENSMUST00000195712 319 ntBASIC13.25□□□□□ -0.29
Nckap1P28660 Gm19184-201ENSMUST00000196798 928 ntBASIC13.25□□□□□ -0.29
Nckap1P28660 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.25□□□□□ -0.29
Nckap1P28660 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nckap1P28660 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nckap1P28660 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nckap1P28660 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Nckap1P28660 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nckap1P28660 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.24□□□□□ -0.29
Nckap1P28660 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm14350-201ENSMUST00000116642 640 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.24□□□□□ -0.29
Nckap1P28660 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.24□□□□□ -0.29
Nckap1P28660 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Nckap1P28660 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 Gm10146-201ENSMUST00000072739 309 ntBASIC13.24□□□□□ -0.29
Nckap1P28660 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.24□□□□□ -0.29
Nckap1P28660 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nckap1P28660 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nckap1P28660 Gm23931-201ENSMUST00000103842 109 ntBASIC13.23□□□□□ -0.29
Nckap1P28660 Gm15198-201ENSMUST00000117283 177 ntBASIC13.23□□□□□ -0.29
Nckap1P28660 Gm26927-201ENSMUST00000182385 965 ntBASIC13.23□□□□□ -0.29
Nckap1P28660 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.23□□□□□ -0.29
Nckap1P28660 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Gm43179-201ENSMUST00000198797 275 ntBASIC13.23□□□□□ -0.29
Nckap1P28660 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Nckap1P28660 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nckap1P28660 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nckap1P28660 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms