Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Gm13612-201ENSMUST00000119276 390 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Gm12138-201ENSMUST00000122180 951 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.03□□□□□ -0.48
Cd40P27512 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm38671-201ENSMUST00000200573 130 ntBASIC12.03□□□□□ -0.48
Cd40P27512 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 Gm17794-201ENSMUST00000220252 955 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm5356-201ENSMUST00000093326 615 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd40P27512 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.02□□□□□ -0.48
Cd40P27512 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.02□□□□□ -0.48
Cd40P27512 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.02□□□□□ -0.48
Cd40P27512 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40P27512 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Cd40P27512 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd40P27512 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd40P27512 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Gm15806-201ENSMUST00000120696 955 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.02□□□□□ -0.49
Cd40P27512 Mir1894-201ENSMUST00000122802 81 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Cd40P27512 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd40P27512 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Gm5745-201ENSMUST00000183748 313 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.02□□□□□ -0.49
Cd40P27512 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.02□□□□□ -0.49
Cd40P27512 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd40P27512 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cd40P27512 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cd40P27512 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40P27512 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd40P27512 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Cd40P27512 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40P27512 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd40P27512 Gm14350-201ENSMUST00000116642 640 ntBASIC12.01□□□□□ -0.49
Cd40P27512 Gm16202-201ENSMUST00000117532 544 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms