Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mir6420-201ENSMUST00000185032 102 ntBASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm37444-201ENSMUST00000193605 439 ntBASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm37497-201ENSMUST00000195830 798 ntBASIC13.67□□□□□ -0.22
Nfkb1P25799 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.67□□□□□ -0.22
Nfkb1P25799 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.66□□□□□ -0.22
Nfkb1P25799 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.66□□□□□ -0.22
Nfkb1P25799 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.66□□□□□ -0.22
Nfkb1P25799 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
Nfkb1P25799 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nfkb1P25799 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Gm10146-201ENSMUST00000072739 309 ntBASIC13.65□□□□□ -0.22
Nfkb1P25799 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nfkb1P25799 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.65□□□□□ -0.22
Nfkb1P25799 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nfkb1P25799 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms