Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Mir1894-201ENSMUST00000122802 81 ntBASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm17794-201ENSMUST00000220252 955 ntBASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1bP25119 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gm5687-201ENSMUST00000118252 640 ntBASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1bP25119 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 Gm13612-201ENSMUST00000119276 390 ntBASIC12.3□□□□□ -0.44
Tnfrsf1bP25119 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms