Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Irf8P23611 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Irf8P23611 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Irf8P23611 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Irf8P23611 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Irf8P23611 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Irf8P23611 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Irf8P23611 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Irf8P23611 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Irf8P23611 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Irf8P23611 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Grk6-205ENSMUST00000224653 2976 ntBASIC14.33□□□□□ -0.12
Irf8P23611 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.33□□□□□ -0.12
Irf8P23611 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.33□□□□□ -0.12
Irf8P23611 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.33□□□□□ -0.12
Irf8P23611 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Gm5035-201ENSMUST00000215581 927 ntBASIC14.33□□□□□ -0.12
Irf8P23611 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Irf8P23611 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Irf8P23611 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Gm11618-201ENSMUST00000117946 267 ntBASIC14.32□□□□□ -0.12
Irf8P23611 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.32□□□□□ -0.12
Irf8P23611 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.32□□□□□ -0.12
Irf8P23611 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.32□□□□□ -0.12
Irf8P23611 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Irf8P23611 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.32□□□□□ -0.12
Irf8P23611 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.31□□□□□ -0.12
Irf8P23611 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.31□□□□□ -0.12
Irf8P23611 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Irf8P23611 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Gm11803-201ENSMUST00000119966 444 ntBASIC14.31□□□□□ -0.12
Irf8P23611 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Gm27486-201ENSMUST00000184923 80 ntBASIC14.31□□□□□ -0.12
Irf8P23611 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Irf8P23611 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms