Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.77□□□□□ -0.69
Cdx1P18111 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.77□□□□□ -0.69
Cdx1P18111 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.77□□□□□ -0.69
Cdx1P18111 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cdx1P18111 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Gm9824-201ENSMUST00000178707 561 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Mir6977-201ENSMUST00000184960 64 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Gm38225-201ENSMUST00000194001 393 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Gm43767-201ENSMUST00000198933 381 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cdx1P18111 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Gm5779-201ENSMUST00000218467 910 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cdx1P18111 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.77□□□□□ -0.69
Cdx1P18111 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Cdx1P18111 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx1P18111 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Cdx1P18111 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.76□□□□□ -0.69
Cdx1P18111 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdx1P18111 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdx1P18111 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdx1P18111 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.76□□□□□ -0.69
Cdx1P18111 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx1P18111 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cdx1P18111 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.75□□□□□ -0.69
Cdx1P18111 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx1P18111 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.75□□□□□ -0.69
Cdx1P18111 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx1P18111 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms