Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rb1P13405 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rb1P13405 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rb1P13405 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rb1P13405 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rb1P13405 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Rb1P13405 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gm12928-201ENSMUST00000117115 573 ntBASIC13.67□□□□□ -0.22
Rb1P13405 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.67□□□□□ -0.22
Rb1P13405 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.67□□□□□ -0.22
Rb1P13405 Gm27847-201ENSMUST00000183711 107 ntBASIC13.67□□□□□ -0.22
Rb1P13405 Gm27375-201ENSMUST00000183799 107 ntBASIC13.67□□□□□ -0.22
Rb1P13405 Gm43094-201ENSMUST00000196549 921 ntBASIC13.67□□□□□ -0.22
Rb1P13405 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.67□□□□□ -0.22
Rb1P13405 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gm10478-201ENSMUST00000084451 396 ntBASIC13.67□□□□□ -0.22
Rb1P13405 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.67□□□□□ -0.22
Rb1P13405 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rb1P13405 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rb1P13405 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.66□□□□□ -0.22
Rb1P13405 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gm17420-201ENSMUST00000164753 153 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gm24420-201ENSMUST00000176676 59 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Gm27772-201ENSMUST00000184900 187 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Gm29649-201ENSMUST00000185649 419 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Gm37424-201ENSMUST00000191727 561 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.66□□□□□ -0.22
Rb1P13405 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.66□□□□□ -0.22
Rb1P13405 Gm18027-201ENSMUST00000218947 619 ntBASIC13.66□□□□□ -0.22
Rb1P13405 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.66□□□□□ -0.22
Rb1P13405 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rb1P13405 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms