Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm19931-201ENSMUST00000198920 368 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col4a2P08122 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col4a2P08122 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Gm12502-201ENSMUST00000120197 444 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.13□□□□□ -0.47
Col4a2P08122 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a2P08122 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a2P08122 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Col4a2P08122 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.12□□□□□ -0.47
Col4a2P08122 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a2P08122 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col4a2P08122 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a2P08122 Gm44405-201ENSMUST00000198952 126 ntBASIC12.12□□□□□ -0.47
Col4a2P08122 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a2P08122 Gm8959-201ENSMUST00000213150 571 ntBASIC12.12□□□□□ -0.47
Col4a2P08122 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Col4a2P08122 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.12□□□□□ -0.47
Col4a2P08122 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.12□□□□□ -0.47
Col4a2P08122 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col4a2P08122 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.12□□□□□ -0.47
Col4a2P08122 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.12□□□□□ -0.47
Col4a2P08122 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a2P08122 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms