Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
P06344 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Gm12390-201ENSMUST00000117897 397 ntBASIC11.86□□□□□ -0.51
P06344 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.86□□□□□ -0.51
P06344 Gm24196-201ENSMUST00000179161 110 ntBASIC11.86□□□□□ -0.51
P06344 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
P06344 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.86□□□□□ -0.51
P06344 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.86□□□□□ -0.51
P06344 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.86□□□□□ -0.51
P06344 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.86□□□□□ -0.51
P06344 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
P06344 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
P06344 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
P06344 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P06344 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P06344 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P06344 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.86□□□□□ -0.51
P06344 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.86□□□□□ -0.51
P06344 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.85□□□□□ -0.51
P06344 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.85□□□□□ -0.51
P06344 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.85□□□□□ -0.51
P06344 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.85□□□□□ -0.51
P06344 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.85□□□□□ -0.51
P06344 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
P06344 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.85□□□□□ -0.51
P06344 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.85□□□□□ -0.51
P06344 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.85□□□□□ -0.51
P06344 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P06344 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
P06344 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.85□□□□□ -0.51
P06344 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06344 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P06344 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
P06344 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.84□□□□□ -0.51
P06344 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.84□□□□□ -0.51
P06344 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.84□□□□□ -0.51
P06344 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.84□□□□□ -0.51
P06344 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.84□□□□□ -0.51
P06344 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Proscos-202ENSMUST00000178990 666 ntBASIC11.84□□□□□ -0.51
P06344 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gm27847-201ENSMUST00000183711 107 ntBASIC11.84□□□□□ -0.51
P06344 Gm27375-201ENSMUST00000183799 107 ntBASIC11.84□□□□□ -0.51
P06344 Gm18062-201ENSMUST00000208020 547 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms