Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.67□□□□□ -0.54
P04224 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.67□□□□□ -0.54
P04224 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.67□□□□□ -0.54
P04224 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.67□□□□□ -0.54
P04224 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.67□□□□□ -0.54
P04224 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
P04224 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
P04224 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.67□□□□□ -0.54
P04224 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
P04224 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.66□□□□□ -0.54
P04224 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P04224 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.66□□□□□ -0.54
P04224 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.66□□□□□ -0.54
P04224 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.66□□□□□ -0.54
P04224 Gm44608-201ENSMUST00000206827 855 ntBASIC11.66□□□□□ -0.54
P04224 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.66□□□□□ -0.54
P04224 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.66□□□□□ -0.54
P04224 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.66□□□□□ -0.54
P04224 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.66□□□□□ -0.54
P04224 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
P04224 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P04224 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P04224 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
P04224 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.65□□□□□ -0.54
P04224 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.65□□□□□ -0.54
P04224 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P04224 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
P04224 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
P04224 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.65□□□□□ -0.54
P04224 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.65□□□□□ -0.54
P04224 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.65□□□□□ -0.54
P04224 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.65□□□□□ -0.54
P04224 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.65□□□□□ -0.54
P04224 Gm20553-201ENSMUST00000204205 844 ntBASIC11.65□□□□□ -0.54
P04224 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.65□□□□□ -0.54
P04224 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
P04224 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms