Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.11□□□□□ -0.63
CfdP03953 Gm21362-201ENSMUST00000194272 928 ntBASIC11.11□□□□□ -0.63
CfdP03953 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.11□□□□□ -0.63
CfdP03953 Dupd1-202ENSMUST00000224735 548 ntBASIC11.11□□□□□ -0.63
CfdP03953 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CfdP03953 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CfdP03953 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.11□□□□□ -0.63
CfdP03953 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CfdP03953 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.11□□□□□ -0.63
CfdP03953 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CfdP03953 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CfdP03953 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CfdP03953 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CfdP03953 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.1□□□□□ -0.63
CfdP03953 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CfdP03953 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.1□□□□□ -0.63
CfdP03953 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
CfdP03953 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.1□□□□□ -0.63
CfdP03953 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.1□□□□□ -0.63
CfdP03953 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Gm18049-201ENSMUST00000208909 581 ntBASIC11.1□□□□□ -0.63
CfdP03953 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.1□□□□□ -0.63
CfdP03953 Gm45612-201ENSMUST00000211320 160 ntBASIC11.1□□□□□ -0.63
CfdP03953 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.1□□□□□ -0.63
CfdP03953 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.1□□□□□ -0.63
CfdP03953 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CfdP03953 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.1□□□□□ -0.63
CfdP03953 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CfdP03953 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.1□□□□□ -0.63
CfdP03953 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CfdP03953 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.1□□□□□ -0.63
CfdP03953 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CfdP03953 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CfdP03953 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.09□□□□□ -0.63
CfdP03953 Gm9727-201ENSMUST00000161387 555 ntBASIC11.09□□□□□ -0.63
CfdP03953 Gm9719-201ENSMUST00000162765 543 ntBASIC11.09□□□□□ -0.63
CfdP03953 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.09□□□□□ -0.63
CfdP03953 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.09□□□□□ -0.63
CfdP03953 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms