Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Gm13612-201ENSMUST00000119276 390 ntBASIC11.17□□□□□ -0.62
Hoxa3P02831 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.17□□□□□ -0.62
Hoxa3P02831 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.17□□□□□ -0.62
Hoxa3P02831 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxa3P02831 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hoxa3P02831 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm15371-201ENSMUST00000117057 784 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Mir1982-201ENSMUST00000157368 74 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm27486-201ENSMUST00000184923 80 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm29608-201ENSMUST00000190444 463 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm8598-201ENSMUST00000221184 836 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gm6091-201ENSMUST00000098307 165 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.16□□□□□ -0.62
Hoxa3P02831 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxa3P02831 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxa3P02831 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.15□□□□□ -0.62
Hoxa3P02831 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.15□□□□□ -0.62
Hoxa3P02831 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms