Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.34□□□□□ -0.11
Vti1aO89116 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.34□□□□□ -0.11
Vti1aO89116 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Gm7399-201ENSMUST00000032395 858 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.34□□□□□ -0.11
Vti1aO89116 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.34□□□□□ -0.11
Vti1aO89116 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vti1aO89116 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1aO89116 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.33□□□□□ -0.11
Vti1aO89116 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1aO89116 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1aO89116 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1aO89116 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.33□□□□□ -0.11
Vti1aO89116 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1aO89116 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1aO89116 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1aO89116 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Vti1aO89116 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
Vti1aO89116 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.33□□□□□ -0.12
Vti1aO89116 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1aO89116 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Gm29705-201ENSMUST00000212598 474 ntBASIC14.33□□□□□ -0.12
Vti1aO89116 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1aO89116 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vti1aO89116 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vti1aO89116 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vti1aO89116 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1aO89116 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vti1aO89116 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
Vti1aO89116 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.32□□□□□ -0.12
Vti1aO89116 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm6013-201ENSMUST00000212264 699 ntBASIC14.32□□□□□ -0.12
Vti1aO89116 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.32□□□□□ -0.12
Vti1aO89116 Gm18041-201ENSMUST00000218210 618 ntBASIC14.32□□□□□ -0.12
Vti1aO89116 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.32□□□□□ -0.12
Vti1aO89116 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms