Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Limk2O54785 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.5□□□□□ -0.25
Limk2O54785 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.5□□□□□ -0.25
Limk2O54785 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Gm29649-201ENSMUST00000185649 419 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.5□□□□□ -0.25
Limk2O54785 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Gm6091-201ENSMUST00000098307 165 ntBASIC13.5□□□□□ -0.25
Limk2O54785 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Limk2O54785 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Limk2O54785 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limk2O54785 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Limk2O54785 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Limk2O54785 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Mir874-201ENSMUST00000104769 76 ntBASIC13.49□□□□□ -0.25
Limk2O54785 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Limk2O54785 Gm5687-201ENSMUST00000118252 640 ntBASIC13.49□□□□□ -0.25
Limk2O54785 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.49□□□□□ -0.25
Limk2O54785 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Mir7221-201ENSMUST00000184009 72 ntBASIC13.49□□□□□ -0.25
Limk2O54785 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.49□□□□□ -0.25
Limk2O54785 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.49□□□□□ -0.25
Limk2O54785 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.49□□□□□ -0.25
Limk2O54785 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Limk2O54785 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limk2O54785 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Limk2O54785 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.48□□□□□ -0.25
Limk2O54785 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Limk2O54785 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.48□□□□□ -0.25
Limk2O54785 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.48□□□□□ -0.25
Limk2O54785 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.48□□□□□ -0.25
Limk2O54785 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.48□□□□□ -0.25
Limk2O54785 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limk2O54785 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms