Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nr1i3O35627 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm15321-201ENSMUST00000121290 288 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm5354-201ENSMUST00000182417 973 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm28760-201ENSMUST00000185995 736 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm29608-201ENSMUST00000190444 463 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm42550-201ENSMUST00000201553 960 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.3□□□□□ -0.12
Nr1i3O35627 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nr1i3O35627 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.3□□□□□ -0.12
Nr1i3O35627 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr1i3O35627 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nr1i3O35627 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr1i3O35627 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.29□□□□□ -0.12
Nr1i3O35627 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.29□□□□□ -0.12
Nr1i3O35627 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.29□□□□□ -0.12
Nr1i3O35627 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nr1i3O35627 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.29□□□□□ -0.12
Nr1i3O35627 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr1i3O35627 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.29□□□□□ -0.12
Nr1i3O35627 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms