Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm25261-201ENSMUST00000157416 134 ntBASIC13.64□□□□□ -0.23
Ptch2O35595 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.64□□□□□ -0.23
Ptch2O35595 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.64□□□□□ -0.23
Ptch2O35595 Gm9257-201ENSMUST00000221254 232 ntBASIC13.64□□□□□ -0.23
Ptch2O35595 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.64□□□□□ -0.23
Ptch2O35595 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ptch2O35595 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ptch2O35595 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptch2O35595 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm8805-201ENSMUST00000117848 313 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 Gm6447-201ENSMUST00000118905 835 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Ptch2O35595 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.63□□□□□ -0.23
Ptch2O35595 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.63□□□□□ -0.23
Ptch2O35595 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.63□□□□□ -0.23
Ptch2O35595 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.63□□□□□ -0.23
Ptch2O35595 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.63□□□□□ -0.23
Ptch2O35595 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ptch2O35595 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ptch2O35595 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ptch2O35595 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ptch2O35595 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ptch2O35595 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ptch2O35595 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.62□□□□□ -0.23
Ptch2O35595 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm6222-202ENSMUST00000182143 629 ntBASIC13.62□□□□□ -0.23
Ptch2O35595 Gm26927-201ENSMUST00000182385 965 ntBASIC13.62□□□□□ -0.23
Ptch2O35595 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ptch2O35595 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.62□□□□□ -0.23
Ptch2O35595 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Gm24526-201ENSMUST00000082921 158 ntBASIC13.62□□□□□ -0.23
Ptch2O35595 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ptch2O35595 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms