Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.52□□□□□ -0.41
Cx3cl1O35188 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.52□□□□□ -0.41
Cx3cl1O35188 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Grk6-205ENSMUST00000224653 2976 ntBASIC12.52□□□□□ -0.41
Cx3cl1O35188 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm12928-201ENSMUST00000117115 573 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm15806-201ENSMUST00000120696 955 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm9002-201ENSMUST00000178437 499 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm29608-201ENSMUST00000190444 463 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm8463-201ENSMUST00000208573 613 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.51□□□□□ -0.41
Cx3cl1O35188 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cl1O35188 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Gm11478-201ENSMUST00000117851 599 ntBASIC12.5□□□□□ -0.41
Cx3cl1O35188 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.5□□□□□ -0.41
Cx3cl1O35188 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.5□□□□□ -0.41
Cx3cl1O35188 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.5□□□□□ -0.41
Cx3cl1O35188 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms