Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AlyrefO08583 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AlyrefO08583 Gm14208-201ENSMUST00000119645 678 ntBASIC13.5□□□□□ -0.25
AlyrefO08583 Gm14726-201ENSMUST00000120623 896 ntBASIC13.5□□□□□ -0.25
AlyrefO08583 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AlyrefO08583 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
AlyrefO08583 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.5□□□□□ -0.25
AlyrefO08583 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AlyrefO08583 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
AlyrefO08583 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm13570-201ENSMUST00000140763 309 ntBASIC13.49□□□□□ -0.25
AlyrefO08583 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.49□□□□□ -0.25
AlyrefO08583 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.49□□□□□ -0.25
AlyrefO08583 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.49□□□□□ -0.25
AlyrefO08583 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.49□□□□□ -0.25
AlyrefO08583 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
AlyrefO08583 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AlyrefO08583 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
AlyrefO08583 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AlyrefO08583 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AlyrefO08583 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.48□□□□□ -0.25
AlyrefO08583 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.48□□□□□ -0.25
AlyrefO08583 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AlyrefO08583 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms