Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm6983-201ENSMUST00000214912 628 ntBASIC14.32□□□□□ -0.12
Usp35M0QWN7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.32□□□□□ -0.12
Usp35M0QWN7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Mir698-201ENSMUST00000102164 109 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.31□□□□□ -0.12
Usp35M0QWN7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp35M0QWN7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gm12742-201ENSMUST00000117326 410 ntBASIC14.3□□□□□ -0.12
Usp35M0QWN7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.3□□□□□ -0.12
Usp35M0QWN7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.3□□□□□ -0.12
Usp35M0QWN7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp35M0QWN7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms