Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 Gm25517-201ENSMUST00000083865 134 ntBASIC18.07■□□□□ 0.48
Tubgcp6G5E8P0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Gm38210-201ENSMUST00000191944 809 ntBASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp6G5E8P0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Matn2-206ENSMUST00000228570 2798 ntBASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Gm13736-201ENSMUST00000119272 253 ntBASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 AC113031.8-201ENSMUST00000227856 631 ntBASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp6G5E8P0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm44651-201ENSMUST00000207343 372 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 CT025551.1-201ENSMUST00000223996 692 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm38157-201ENSMUST00000194178 1698 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm37795-201ENSMUST00000194216 2459 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gm13492-201ENSMUST00000119772 665 ntBASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp6G5E8P0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Gm6963-201ENSMUST00000147879 379 ntBASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Gm5904-201ENSMUST00000210286 865 ntBASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tubgcp6G5E8P0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms